5QM0
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure D7_1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 117.781, 64.322, 74.585 |
| Unit cell angles | 90.00, 125.72, 90.00 |
Refinement procedure
| Resolution | 34.806 - 1.917 |
| R-factor | 0.2359 |
| Rwork | 0.234 |
| R-free | 0.27380 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.311 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 34.810 | 34.810 | 1.960 |
| High resolution limit [Å] | 1.920 | 8.990 | 1.920 |
| Rmerge | 0.044 | 0.024 | 0.659 |
| Rmeas | 0.050 | 0.029 | 0.761 |
| Rpim | 0.025 | 0.016 | 0.375 |
| Total number of observations | 141631 | 1258 | 8922 |
| Number of reflections | 34474 | 348 | 2232 |
| <I/σ(I)> | 12.1 | 30.5 | 1.4 |
| Completeness [%] | 98.9 | 95.8 | 96.2 |
| Redundancy | 4.1 | 3.6 | 4 |
| CC(1/2) | 0.996 | 0.953 | 0.810 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |
