5QLE
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure C2_1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-18 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.95370 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.632, 64.719, 74.490 |
Unit cell angles | 90.00, 125.84, 90.00 |
Refinement procedure
Resolution | 34.787 - 1.954 |
R-factor | 0.2369 |
Rwork | 0.236 |
R-free | 0.27670 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.331 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.790 | 34.790 | 2.000 |
High resolution limit [Å] | 1.950 | 8.950 | 1.950 |
Rmerge | 0.064 | 0.037 | 0.665 |
Rmeas | 0.074 | 0.043 | 0.769 |
Rpim | 0.036 | 0.022 | 0.380 |
Total number of observations | 132211 | 1242 | 7995 |
Number of reflections | 32089 | 333 | 2029 |
<I/σ(I)> | 8.3 | 18.7 | 1.2 |
Completeness [%] | 97.2 | 90.1 | 89 |
Redundancy | 4.1 | 3.7 | 3.9 |
CC(1/2) | 0.998 | 0.995 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |