5QHR
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000635a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91587 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 50.494, 50.494, 153.169 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.490 - 1.680 |
R-factor | 0.2058 |
Rwork | 0.204 |
R-free | 0.24170 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lzk |
RMSD bond length | 0.016 |
RMSD bond angle | 1.668 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 153.170 | 153.170 | 1.720 |
High resolution limit [Å] | 1.680 | 7.510 | 1.680 |
Rmerge | 0.054 | 0.032 | 1.595 |
Rmeas | 0.057 | 0.034 | 1.725 |
Rpim | 0.020 | 0.013 | 0.648 |
Total number of observations | 190644 | 2344 | 11807 |
Number of reflections | 23603 | ||
<I/σ(I)> | 14.8 | 44.8 | 1.2 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 8.1 | 6.7 | 7 |
CC(1/2) | 0.999 | 0.999 | 0.528 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 27.3% Tacsimate pH 7.0, 0.15 M NaCl |