Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QDH

PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMOPL000004a

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-09-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.92819
Spacegroup nameP 31 2 1
Unit cell lengths89.854, 89.854, 106.510
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution62.833 - 1.682
R-factor0.2379
Rwork0.237
R-free0.25730
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.020
RMSD bond angle1.642
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]77.81677.8161.780
High resolution limit [Å]1.6805.0401.680
Rmerge0.1320.0571.270
Rmeas0.1480.0631.412
Total number of observations545887
Number of reflections109162408517718
<I/σ(I)>9.1432.291.01
Completeness [%]99.9100100
CC(1/2)0.9960.9970.535
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5277well solution: 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon