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5QD0

Crystal structure of BACE complex withBMC006

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyCCD
Collection date2006-06-01
DetectorMARMOSAIC 225 mm CCD
Spacegroup nameP 1 21 1
Unit cell lengths79.919, 102.374, 98.643
Unit cell angles90.00, 104.69, 90.00
Refinement procedure
Resolution46.170 - 2.600
R-factor0.167
Rwork0.165
R-free0.20700
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.924
Data scaling softwareSCALEPACK
Phasing softwareCNX
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 Overall
Low resolution limit [Å]46.168
High resolution limit [Å]2.600
Rmerge0.082
Number of reflections47152
Completeness [%]99.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1hanging drop5292CRYSTALS WERE GROWN AT 19C BY VAPOUR DIFFUSION IN HANGING DROPS, FROM 1.0M AMMONIUM PHOSPHATE, 0.1M SODIUM CITRATE, PH 5.0. PROTEIN STOCK WAS BACE MUT46B BATCH XIV 6.3MG/ML IN 10MM TRIS-HCL PH 7.4, 25MM NACL, WITH A 7-FOLD EXCESS OF BMC006 ADDED FROM A 50MM STOCK SOLUTION IN 90% DMSO-D6 (2.0% DMSO IN DROP). A SOLUTION CONTAINING 1.2M AMMONIUM PHOSPHATE, 0.1M SODIUM CITRATE PH 5.0, 25% GLYCEROL, 1MM BMC006 AND 2.0% DMSO WAS USED AS CRYO-PROTECTANT.

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