5Q92
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 248)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2017-04-12 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.923, 56.844, 114.933 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 56.880 - 2.110 |
| R-factor | 0.2198 |
| Rwork | 0.216 |
| R-free | 0.28850 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.649 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.31) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 56.880 | 56.880 | 2.160 |
| High resolution limit [Å] | 2.110 | 9.440 | 2.110 |
| Rmerge | 0.248 | 0.099 | 2.012 |
| Rmeas | 0.270 | 0.107 | 2.198 |
| Rpim | 0.107 | 0.042 | 0.877 |
| Total number of observations | 125722 | 1633 | 9214 |
| Number of reflections | 20340 | ||
| <I/σ(I)> | 4.6 | 11.7 | 1.3 |
| Completeness [%] | 100.0 | 99.8 | 100 |
| Redundancy | 6.2 | 5.7 | 6.2 |
| CC(1/2) | 0.989 | 0.983 | 0.656 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
