5Q5N
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 124)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2017-04-11 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.775, 57.557, 114.791 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 57.450 - 2.420 |
| R-factor | 0.2565 |
| Rwork | 0.250 |
| R-free | 0.37170 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.511 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.31) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 57.450 | 57.450 | 2.480 |
| High resolution limit [Å] | 2.420 | 10.820 | 2.420 |
| Rmerge | 0.236 | 0.037 | 1.822 |
| Rmeas | 0.257 | 0.041 | 1.972 |
| Rpim | 0.100 | 0.017 | 0.747 |
| Total number of observations | 86938 | 1080 | 6590 |
| Number of reflections | 13667 | ||
| <I/σ(I)> | 4.5 | 14.9 | 0.8 |
| Completeness [%] | 100.0 | 99.8 | 100 |
| Redundancy | 6.4 | 5.5 | 6.8 |
| CC(1/2) | 0.992 | 0.999 | 0.760 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
