5Q4Z
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 100)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.141, 57.177, 115.237 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 28.810 - 1.600 |
| R-factor | 0.1893 |
| Rwork | 0.188 |
| R-free | 0.22140 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.023 |
| RMSD bond angle | 2.067 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.810 | 28.810 | 1.640 |
| High resolution limit [Å] | 1.600 | 7.160 | 1.600 |
| Rmerge | 0.044 | 0.017 | 0.768 |
| Rmeas | 0.047 | 0.019 | 0.834 |
| Rpim | 0.019 | 0.007 | 0.323 |
| Total number of observations | 301431 | 3625 | 21891 |
| Number of reflections | 46271 | ||
| <I/σ(I)> | 24.3 | 87 | 2.4 |
| Completeness [%] | 99.9 | 98.5 | 99 |
| Redundancy | 6.5 | 6.1 | 6.5 |
| CC(1/2) | 1.000 | 1.000 | 0.797 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
