5Q49
PanDDA analysis group deposition -- Crystal Structure of DCLRE1A after initial refinement with no ligand modelled (structure 74)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-09-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.990, 58.130, 114.580 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 57.360 - 1.380 |
| R-factor | 0.2119 |
| Rwork | 0.210 |
| R-free | 0.24530 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5aho |
| RMSD bond length | 0.021 |
| RMSD bond angle | 1.894 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.27) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 57.360 | 58.130 | 1.420 |
| High resolution limit [Å] | 1.380 | 6.170 | 1.380 |
| Rmerge | 0.056 | 0.043 | 1.446 |
| Rmeas | 0.061 | 0.047 | 1.609 |
| Rpim | 0.024 | 0.019 | 0.698 |
| Total number of observations | 460533 | 5641 | 27947 |
| Number of reflections | 72234 | ||
| <I/σ(I)> | 13.8 | 44.5 | 1.1 |
| Completeness [%] | 100.0 | 99.7 | 100 |
| Redundancy | 6.4 | 6 | 5.3 |
| CC(1/2) | 0.999 | 0.997 | 0.633 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 30% PEG 1000, 0.1M MIB buffer |
