5PGL
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 185)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.891, 95.807, 57.453 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.730 - 2.230 |
R-factor | 0.2214 |
Rwork | 0.219 |
R-free | 0.26450 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.017 |
RMSD bond angle | 1.736 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.730 | 28.730 | 2.310 |
High resolution limit [Å] | 2.230 | 8.340 | 2.230 |
Rmerge | 0.105 | 0.024 | 0.524 |
Rmeas | 0.116 | 0.027 | 0.592 |
Rpim | 0.048 | 0.010 | 0.269 |
Total number of observations | 66714 | 1486 | 5670 |
Number of reflections | 11246 | ||
<I/σ(I)> | 14.2 | 42.4 | 4.2 |
Completeness [%] | 98.9 | 97.9 | 94 |
Redundancy | 5.9 | 6 | 5.2 |
CC(1/2) | 0.994 | 1.000 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |