5PG9
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 173)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.216, 96.797, 57.996 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.000 - 1.620 |
R-factor | 0.1855 |
Rwork | 0.184 |
R-free | 0.21290 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.025 |
RMSD bond angle | 2.047 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.000 | 29.000 | 1.650 |
High resolution limit [Å] | 1.620 | 8.890 | 1.620 |
Rmerge | 0.060 | 0.037 | 0.353 |
Rmeas | 0.066 | 0.041 | 0.468 |
Rpim | 0.026 | 0.016 | 0.304 |
Total number of observations | 118627 | 1320 | 367 |
Number of reflections | 23662 | ||
<I/σ(I)> | 14.2 | 41.8 | 1 |
Completeness [%] | 79.8 | 97.5 | 20.5 |
Redundancy | 5 | 6.2 | 1.3 |
CC(1/2) | 0.998 | 0.996 | 0.484 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |