5PFW
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 160)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.690, 96.619, 57.847 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.920 - 1.640 |
R-factor | 0.1947 |
Rwork | 0.193 |
R-free | 0.22170 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.026 |
RMSD bond angle | 2.105 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.920 | 28.920 | 1.660 |
High resolution limit [Å] | 1.640 | 8.960 | 1.640 |
Rmerge | 0.074 | 0.059 | 0.614 |
Rmeas | 0.080 | 0.064 | 0.748 |
Rpim | 0.032 | 0.025 | 0.415 |
Total number of observations | 137572 | 1237 | 1499 |
Number of reflections | 26221 | ||
<I/σ(I)> | 11.2 | 30.7 | 1.1 |
Completeness [%] | 91.6 | 97.4 | 51.1 |
Redundancy | 5.2 | 6.1 | 2.1 |
CC(1/2) | 0.997 | 0.990 | 0.543 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |