5PCG
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 37)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.724, 96.457, 58.467 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.230 - 1.980 |
R-factor | 0.2052 |
Rwork | 0.203 |
R-free | 0.24580 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.021 |
RMSD bond angle | 1.798 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.230 | 29.230 | 2.030 |
High resolution limit [Å] | 1.980 | 9.070 | 1.980 |
Rmerge | 0.171 | 0.048 | 1.177 |
Rmeas | 0.187 | 0.052 | 1.363 |
Rpim | 0.075 | 0.020 | 0.661 |
Total number of observations | 98067 | 1206 | 1939 |
Number of reflections | 16036 | ||
<I/σ(I)> | 8.1 | 26.1 | 0.8 |
Completeness [%] | 96.2 | 97.4 | 49.6 |
Redundancy | 6.1 | 5.9 | 3.4 |
CC(1/2) | 0.993 | 0.999 | 0.521 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |