5PCE
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 35)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.168, 96.560, 57.548 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.770 - 2.160 |
R-factor | 0.199 |
Rwork | 0.197 |
R-free | 0.24410 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.018 |
RMSD bond angle | 1.721 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.770 | 28.770 | 2.230 |
High resolution limit [Å] | 2.160 | 8.930 | 2.160 |
Rmerge | 0.143 | 0.041 | 1.594 |
Rmeas | 0.157 | 0.045 | 1.792 |
Rpim | 0.063 | 0.017 | 0.791 |
Total number of observations | 74579 | 1246 | 3614 |
Number of reflections | 12089 | ||
<I/σ(I)> | 9.8 | 25.6 | 1.2 |
Completeness [%] | 96.5 | 97.5 | 77.3 |
Redundancy | 6.2 | 6 | 4.4 |
CC(1/2) | 0.993 | 0.999 | 0.556 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |