5PC5
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 26)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.673, 96.381, 57.738 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.870 - 1.850 |
R-factor | 0.1865 |
Rwork | 0.184 |
R-free | 0.22640 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3g0l |
RMSD bond length | 0.021 |
RMSD bond angle | 1.803 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.870 | 28.870 | 1.880 |
High resolution limit [Å] | 1.850 | 9.040 | 1.850 |
Rmerge | 0.099 | 0.037 | 1.080 |
Rmeas | 0.108 | 0.041 | 1.209 |
Rpim | 0.043 | 0.016 | 0.529 |
Total number of observations | 124029 | 1202 | 3821 |
Number of reflections | 19600 | ||
<I/σ(I)> | 10.6 | 32.1 | 1.3 |
Completeness [%] | 98.0 | 97.3 | 70.3 |
Redundancy | 6.3 | 6.1 | 4.6 |
CC(1/2) | 0.997 | 0.997 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 30% PEG600 -- 0.1M MES pH 6.0 |