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5P7T

Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 326

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.3
Synchrotron siteBESSY
Beamline14.3
Temperature [K]100
Detector technologyCCD
Collection date2014-01-22
DetectorMAR CCD 165 mm
Wavelength(s)0.895
Spacegroup nameP 1 21 1
Unit cell lengths45.322, 73.111, 52.928
Unit cell angles90.00, 109.60, 90.00
Refinement procedure
Resolution22.552 - 1.459
R-factor0.1398
Rwork0.138
R-free0.17030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4y5l
RMSD bond length0.007
RMSD bond angle1.169
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER (2.5.7)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.6961.550
High resolution limit [Å]1.4604.3601.460
Rmerge0.0680.0200.651
Rmeas0.0780.0230.747
Total number of observations237132
Number of reflections5634021778963
<I/σ(I)>16.2157.632.24
Completeness [%]99.699.198.7
Redundancy4.208
CC(1/2)0.9990.9990.739
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62900.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 326 with the SMILES code CC1=CC2=CC(O)=CN2C(=O)[C@H]1C#N

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