5OZZ
Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 46
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-09-04 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.91841 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 45.296, 73.494, 52.840 |
| Unit cell angles | 90.00, 109.77, 90.00 |
Refinement procedure
| Resolution | 34.905 - 1.527 |
| R-factor | 0.1349 |
| Rwork | 0.133 |
| R-free | 0.17150 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4y5l |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.150 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER (2.5.7) |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 42.627 | 1.620 | |
| High resolution limit [Å] | 1.530 | 4.560 | 1.530 |
| Rmerge | 0.062 | 0.019 | 0.479 |
| Rmeas | 0.071 | 0.022 | 0.550 |
| Total number of observations | 204779 | ||
| Number of reflections | 48846 | 1908 | 7665 |
| <I/σ(I)> | 17.1 | 51.27 | 2.95 |
| Completeness [%] | 98.7 | 99.4 | 95.8 |
| Redundancy | 4.192 | ||
| CC(1/2) | 0.999 | 0.999 | 0.827 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 46 with the SMILES code CCC[C@H]1C[C@@H](C)C(=O)NC1=O |






