5OQZ
Crystal structure of the lasso peptide rubrivinodin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-08-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.799905 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 15.034, 27.243, 15.174 |
Unit cell angles | 90.00, 116.76, 90.00 |
Refinement procedure
Resolution | 13.622 - 0.806 |
R-factor | 0.0848 |
Rwork | 0.084 |
R-free | 0.09130 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.014 |
RMSD bond angle | 2.147 |
Data reduction software | XDS (VERSION March 30, 2013) |
Data scaling software | XPREP (v. 2014/2) |
Phasing software | SHELXDE |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 0.800 |
Number of reflections | 9545 |
<I/σ(I)> | 35.85 |
Completeness [%] | 81.8 |
Redundancy | 3 |
CC(1/2) | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 291.15 | 0.7 M sodium acetate pH 4.6, 30%(v/v) glycerol, 4.6%(w/v) PEG 4000 |