5OP3
Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96858 |
Spacegroup name | H 3 |
Unit cell lengths | 120.746, 120.746, 24.653 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.856 - 1.359 |
R-factor | 0.1341 |
Rwork | 0.133 |
R-free | 0.16050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oos |
RMSD bond length | 0.012 |
RMSD bond angle | 1.194 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.373 | 60.373 | 1.383 |
High resolution limit [Å] | 1.359 | 3.690 | 1.359 |
Rmerge | 0.077 | 0.041 | 1.392 |
Rmeas | 0.080 | 0.042 | 1.486 |
Rpim | 0.018 | 0.009 | 0.513 |
Total number of observations | 489874 | ||
Number of reflections | 28830 | ||
<I/σ(I)> | 18.7 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 17 | 20 | 8.3 |
CC(1/2) | 0.999 | 0.999 | 0.568 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.6 | 298 | 0.02 M CaCl2, 0.1 M Na Acet 4.6 pH, 30 %v/v MPD |