5OMM
GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-14
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-23 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.512, 94.209, 101.284 |
Unit cell angles | 90.00, 112.70, 90.00 |
Refinement procedure
Resolution | 48.497 - 1.700 |
R-factor | 0.1662 |
Rwork | 0.166 |
R-free | 0.19290 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.164 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.497 | 48.497 | 1.750 |
High resolution limit [Å] | 1.650 | 4.920 | 1.650 |
Rmerge | 0.064 | 0.027 | 0.561 |
Rmeas | 0.072 | 0.030 | 0.628 |
Total number of observations | 488528 | ||
Number of reflections | 99684 | 3904 | 15617 |
<I/σ(I)> | 16.55 | 49.28 | 2.78 |
Completeness [%] | 98.0 | 99.2 | 95.3 |
Redundancy | 4.901 | 4.904 | 4.887 |
CC(1/2) | 0.999 | 0.999 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.1 M sodium citrate, 20% (w/v) PEG3000 |