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5OM1

Structure of the A2A-StaR2-bRIL562-Compound 4e complex at 2.1A obtained from in meso soaking experiments (1 hour soak).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2015-11-30
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96857
Spacegroup nameC 2 2 21
Unit cell lengths39.537, 179.854, 140.323
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.830 - 2.100
R-factor0.1892
Rwork0.188
R-free0.20970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5mzj
RMSD bond length0.002
RMSD bond angle0.923
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12rc2_2821: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.8302.160
High resolution limit [Å]2.1002.100
Rmerge0.1461.355
Rpim0.0610.564
Number of reflections298862394
<I/σ(I)>101.5
Completeness [%]100.0100
Redundancy6.66.7
CC(1/2)0.9970.524
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE293.15Crystal growth: 0.l M tri-sodium citrate pH 5.3-5.4, 0.05 M sodium thiocyanate, 29-32% PEG400, 2% (v/v) 2,5-hexanediol and 0.5 mM theophylline Compound 4e was added to the mother liquor to a concentration of 0.005 mM for the soaking experiments.

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PDB entries from 2024-07-17

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