5OJK
Crystal structure of the human neuroligin 1 cholinesterase domain containing spliced sequence B (SSB) (NL1(-A+B))
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2013-01-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96860 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 49.570, 118.050, 214.340 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.700 - 2.550 |
R-factor | 0.2381 |
Rwork | 0.236 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bix |
RMSD bond length | 0.003 |
RMSD bond angle | 0.782 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2044)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.700 | 2.620 |
High resolution limit [Å] | 2.550 | 2.550 |
Rpim | 0.068 | 0.484 |
Number of reflections | 40826 | 3077 |
<I/σ(I)> | 8.4 | 1.5 |
Completeness [%] | 97.3 | 98.8 |
Redundancy | 7.5 | 7.3 |
CC(1/2) | 0.999 | 0.541 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M KSCN, 0.1M Bis-tris propane pH 8.5, 20% w/v PEG3350 |