5OHN
Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (low resolution)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-01-17 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.928190 |
Spacegroup name | P 65 |
Unit cell lengths | 181.834, 181.834, 94.957 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 157.473 - 3.600 |
R-factor | 0.2174 |
Rwork | 0.211 |
R-free | 0.25260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ohk |
RMSD bond length | 0.020 |
RMSD bond angle | 1.619 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12rc2_2821: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 157.470 | 3.940 |
High resolution limit [Å] | 3.600 | 3.600 |
Rmerge | 0.124 | 0.900 |
Rpim | 0.072 | 0.523 |
Number of reflections | 20776 | 4948 |
<I/σ(I)> | 10 | 1.9 |
Completeness [%] | 99.3 | 99.6 |
Redundancy | 7 | 7.2 |
CC(1/2) | 0.997 | 0.593 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 20% (w/v) PAA 5100 Na, 100 mM Hepes pH 8.0, 2.5% (v/v) glycerol |