5OEA
Structure of large terminase from the thermophilic bacteriophage D6E in complex with ATP-gamma-S (Crystal form 3)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 |
Unit cell lengths | 101.476, 102.981, 103.044 |
Unit cell angles | 90.98, 119.37, 117.18 |
Refinement procedure
Resolution | 45.900 - 3.000 |
R-factor | 0.1928 |
Rwork | 0.190 |
R-free | 0.25330 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.111 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.900 | 45.900 | 3.080 |
High resolution limit [Å] | 3.000 | 13.420 | 3.000 |
Rmerge | 0.075 | 0.023 | 0.811 |
Rmeas | 0.104 | 0.032 | 1.123 |
Rpim | 0.071 | 0.022 | 0.775 |
Number of reflections | 59382 | ||
<I/σ(I)> | 6.3 | ||
Completeness [%] | 96.5 | 92.9 | 96.5 |
Redundancy | 1.9 | 1.9 | 2 |
CC(1/2) | 0.996 | 0.998 | 0.379 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.2 M Ammonium Sulafte, 0.1 M HEPES pH 8.0 |