Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OEA

Structure of large terminase from the thermophilic bacteriophage D6E in complex with ATP-gamma-S (Crystal form 3)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2016-07-04
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameP 1
Unit cell lengths101.476, 102.981, 103.044
Unit cell angles90.98, 119.37, 117.18
Refinement procedure
Resolution45.900 - 3.000
R-factor0.1928
Rwork0.190
R-free0.25330
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.111
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.90045.9003.080
High resolution limit [Å]3.00013.4203.000
Rmerge0.0750.0230.811
Rmeas0.1040.0321.123
Rpim0.0710.0220.775
Number of reflections59382
<I/σ(I)>6.3
Completeness [%]96.592.996.5
Redundancy1.91.92
CC(1/2)0.9960.9980.379
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2931.2 M Ammonium Sulafte, 0.1 M HEPES pH 8.0

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon