5ODE
Structure of a novel oxidoreductase from Gloeobacter violaceus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.99986 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 57.229, 136.419, 267.676 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.772 - 2.196 |
R-factor | 0.2473 |
Rwork | 0.246 |
R-free | 0.26580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jri |
RMSD bond length | 0.003 |
RMSD bond angle | 0.552 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12rc1_2801: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.772 | 2.270 |
High resolution limit [Å] | 2.195 | 2.195 |
Rmerge | 0.099 | 1.031 |
Rpim | 0.031 | 0.325 |
Number of reflections | 38467 | 1912 |
<I/σ(I)> | 16.8 | 2.1 |
Completeness [%] | 96.4 | 95.7 |
Redundancy | 12.5 | 11.4 |
CC(1/2) | 0.998 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.1 M HEPES, pH 7.5 1.5 M Lis2SO4 |