5OCL
Nanobody-anti-VGLUT nanobody complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-24 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 126.295, 126.295, 240.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.812 - 2.200 |
R-factor | 0.1889 |
Rwork | 0.188 |
R-free | 0.20770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4WGV |
RMSD bond length | 0.002 |
RMSD bond angle | 0.539 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.300 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.166 | 1.490 |
Number of reflections | 99098 | 12196 |
<I/σ(I)> | 14.7 | 2.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 26.2 | 26.6 |
CC(1/2) | 1.000 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 3.5 M Sodiumformate |