5OAR
Crystal structure of native beta-N-acetylhexosaminidase isolated from Aspergillus oryzae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-01 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.25 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 105.752, 105.752, 285.807 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.370 - 2.300 |
R-factor | 0.1913 |
Rwork | 0.189 |
R-free | 0.24120 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.373 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.370 | 23.370 | 2.440 |
High resolution limit [Å] | 2.300 | 6.680 | 2.300 |
Rmerge | 0.056 | 0.040 | 0.565 |
Rmeas | 0.061 | 0.043 | 0.661 |
Total number of observations | 356227 | ||
Number of reflections | 59259 | 2837 | 5671 |
<I/σ(I)> | 19.6 | 39.8 | 1.93 |
Completeness [%] | 81.3 | 86 | 49.4 |
Redundancy | 6.011 | 7.036 | 2.641 |
CC(1/2) | 0.998 | 0.998 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 1 M ammonium sulfate, 20% PEG 3350 and 100 mM HEPES pH 8.0 |