5O5Y
Crystal structure of Thermococcus litoralis ADP-dependent glucokinase (GK)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9801 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 96.640, 97.610, 113.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.122 - 1.915 |
R-factor | 0.1727 |
Rwork | 0.171 |
R-free | 0.20880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5o5x |
RMSD bond length | 0.007 |
RMSD bond angle | 0.834 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5) |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.122 | 1.983 |
High resolution limit [Å] | 1.915 | 1.915 |
Rmerge | 0.078 | 0.741 |
Rmeas | 0.083 | 0.792 |
Number of reflections | 82817 | 7810 |
<I/σ(I)> | 15.81 | 2.45 |
Completeness [%] | 99.0 | 95 |
Redundancy | 8.4 | 7.7 |
CC(1/2) | 0.999 | 0.905 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M lithium sulfate, 20% (w/v) PEG 3350, 30 mM glucose |