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5O4N

Apo HcgC from Methanococcus maripaludis soaked with SAH and pyridinol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-17
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.00001
Spacegroup nameP 1 21 1
Unit cell lengths72.556, 80.997, 97.808
Unit cell angles90.00, 108.24, 90.00
Refinement procedure
Resolution30.010 - 2.050
R-factor0.1988
Rwork0.197
R-free0.23570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5o4j
RMSD bond length0.010
RMSD bond angle1.150
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.22)
Phasing softwareMOLREP (11.4.06)
Refinement softwareBUSTER (2.10.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5502.160
High resolution limit [Å]2.0502.050
Rmerge0.1030.717
Rpim0.0720.498
Number of reflections652489601
<I/σ(I)>6.21.4
Completeness [%]96.798
Redundancy2.92.9
CC(1/2)0.9930.600
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5281The drop consists of 1 ul of enzyme solution containing 5 mg/ml HcgC mixed with 1 ul of the reservoir solution : 100 mM HEPES/NaOH pH 7.5, 0.1 M NaCl, and 30% MPD (2-Methyl-2,4-pentanediol). The soaking was performed overnight in the same crystallization buffer containing 2 mM SAH and 3 mM pyridinol (dissolved in 100% DMSO).

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