Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5O0D

Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 3-Phenoxymandelic acid (Fragment 4)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2016-08-10
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameC 2 2 21
Unit cell lengths75.913, 125.192, 119.144
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution62.596 - 1.539
R-factor0.2012
Rwork0.200
R-free0.22720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5o06
RMSD bond length0.007
RMSD bond angle1.056
Data reduction softwareXDS
Data scaling softwareAimless (0.5.26)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]119.140119.1401.620
High resolution limit [Å]1.5394.8701.540
Rmerge0.1460.1311.269
Rmeas0.1560.1411.359
Rpim0.0560.0510.483
Number of reflections84215
<I/σ(I)>9
Completeness [%]100.099.9100
Redundancy7.87.27.7
CC(1/2)0.9920.9840.606
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291200mM Sodium Bromide 20-25% PEG 3350 0.1M Bis-Tris propane

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon