5NZ6
The structure of the thermobifida fusca guanidine III riboswitch with guanidine in space group P3212.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.92019 |
Spacegroup name | P 32 1 2 |
Unit cell lengths | 83.560, 83.560, 98.814 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.938 - 2.940 |
R-factor | 0.1924 |
Rwork | 0.191 |
R-free | 0.21690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5nwq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.721 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2219: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.410 | 2.990 |
High resolution limit [Å] | 2.940 | 2.940 |
Rmerge | 0.101 | 1.658 |
Rpim | 0.023 | 0.367 |
Number of reflections | 16177 | 434 |
<I/σ(I)> | 18.2 | 1.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 21.57 | 21.1 |
CC(1/2) | 0.965 | 0.964 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 60% v/v Tacsimate pH 7.0 |