5NXT
Wobble base paired RNA double helix
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2016-01-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 44.997, 44.997, 94.205 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.969 - 1.379 |
R-factor | 0.1308 |
Rwork | 0.130 |
R-free | 0.15140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ts0 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.490 |
Data reduction software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.970 | 1.460 |
High resolution limit [Å] | 1.379 | 1.380 |
Number of reflections | 12286 | |
<I/σ(I)> | 15.08 | 1.5 |
Completeness [%] | 99.7 | 99.8 |
Redundancy | 10.47 | |
CC(1/2) | 1.000 | 0.690 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 277 | PEG 6000, Lithium chloride, Citric Acid |