5NXL
Formylglycine generating enzyme from T. curvata in complex with Ag(I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-09 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.947, 65.572, 99.501 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.634 - 1.660 |
R-factor | 0.1715 |
Rwork | 0.170 |
R-free | 0.19780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2q17 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.819 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.28) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.950 | 40.950 | 1.690 |
High resolution limit [Å] | 1.660 | 9.090 | 1.660 |
Rmerge | 0.099 | 0.027 | 0.948 |
Rmeas | 0.108 | 0.029 | 1.028 |
Rpim | 0.042 | 0.012 | 0.392 |
Number of reflections | 32476 | ||
<I/σ(I)> | 14.6 | ||
Completeness [%] | 100.0 | 99.5 | 99.9 |
Redundancy | 6.5 | 5.5 | 6.7 |
CC(1/2) | 0.999 | 0.999 | 0.678 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | MPD, sodium acetate and calcium chloride |