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5NWN

Deinococcus radiodurans BphP PAS-GAF-PHY Y263F mutant, dark

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-30
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97779
Spacegroup nameP 21 21 21
Unit cell lengths84.110, 197.120, 214.110
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.940 - 3.600
R-factor0.2495
Rwork0.247
R-free0.28680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5c5k
RMSD bond length0.007
RMSD bond angle1.175
Data reduction softwareXDS
Data scaling softwareXSCALE (Nov 1, 2016)
Phasing softwarePHASER (2.5.7)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.94019.9403.690
High resolution limit [Å]3.60015.0003.600
Rmerge0.0720.0271.414
Rmeas0.0820.0311.592
Number of reflections407503552947
<I/σ(I)>11.5937.750.9
Completeness [%]96.650.998.8
Redundancy4.3893.6284.522
CC(1/2)0.9990.9990.343
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5293100 mM Tris/HCL pH 8.5, 200 mM sodium acetate trihydrate, 30% PEG4000

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PDB entries from 2024-04-17

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