5NW3
The cryofrozen atomic resolution X-ray crystal structure of perdeuterated Pyrococcus furiosus Rubredoxin (100K, 0.59A resolution)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-07-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.619920 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.622, 34.533, 43.071 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.535 - 0.590 |
R-factor | 0.1351 |
Rwork | 0.135 |
R-free | 0.14580 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | ACORN |
Refinement software | PHENIX ((1.10_2142: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.070 | 0.600 |
High resolution limit [Å] | 0.590 | 0.590 |
Rmerge | 0.042 | 0.427 |
Rmeas | 0.051 | 0.578 |
Rpim | 0.020 | 0.369 |
Number of reflections | 115950 | 5865 |
<I/σ(I)> | 17.7 | 2.1 |
Completeness [%] | 85.6 | 30.3 |
Redundancy | 5.5 | 2.2 |
CC(1/2) | 0.999 | 0.563 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | seeded 3.4M equimolar Na/K phosphate buffer |