5NS6
Crystal structure of beta-glucosidase BglM-G1 from marine metagenome
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00238 |
Spacegroup name | P 43 |
Unit cell lengths | 138.020, 138.020, 97.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.797 - 1.500 |
R-factor | 0.1513 |
Rwork | 0.150 |
R-free | 0.17200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1od0 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.833 |
Data reduction software | XDS (30-Sep-2016) |
Data scaling software | XSCALE (30-Sep-2016) |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX (dev_2621) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.797 | 48.797 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.140 | 0.034 | 2.382 |
Rmeas | 0.145 | 0.036 | 2.474 |
Total number of observations | 3976013 | ||
Number of reflections | 292649 | 3397 | 21554 |
<I/σ(I)> | 13.31 | 60.54 | 1.05 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 13.586 | 13.436 | 13.705 |
CC(1/2) | 0.999 | 1.000 | 0.299 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 291 | 0.1M Na-HEPES, 2M AmmSO4, 2% PEG400 |