5NQG
Crystal structure of Plasmodium vivax AMA1 in complex with a 39 aa PvRON2 peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 1 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 1 |
| Temperature [K] | 110 |
| Detector technology | PIXEL |
| Collection date | 2016-10-09 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97857 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 164.460, 54.000, 62.130 |
| Unit cell angles | 90.00, 105.71, 90.00 |
Refinement procedure
| Resolution | 39.580 - 2.150 |
| R-factor | 0.1768 |
| Rwork | 0.174 |
| R-free | 0.22620 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1w8k |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.090 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.2) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.500 | 2.270 |
| High resolution limit [Å] | 2.150 | 2.150 |
| Rmerge | 0.087 | 0.750 |
| Rpim | 0.052 | 0.452 |
| Number of reflections | 28667 | 4162 |
| <I/σ(I)> | 9.6 | 1.9 |
| Completeness [%] | 99.6 | 99.8 |
| Redundancy | 3.7 | 3.7 |
| CC(1/2) | 0.997 | 0.698 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 290 | PEG 3350, sodium citrate, isopropanol |
