Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NO9

NLPPya in complex with mannosamine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 5.2R
Synchrotron siteELETTRA
Beamline5.2R
Temperature [K]100
Detector technologyPIXEL
Collection date2015-11-16
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.0
Spacegroup nameC 2 2 21
Unit cell lengths115.026, 122.284, 121.138
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.586 - 1.750
R-factor0.1752
Rwork0.174
R-free0.20310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3GNU truncated
RMSD bond length0.006
RMSD bond angle0.808
Data reduction softwareXDS (VERSION March 1, 2015)
Data scaling softwareXSCALE (VERSION March 1, 2015)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.11.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]36.58636.5861.850
High resolution limit [Å]1.7505.2101.750
Rmerge0.1080.0540.805
Rmeas0.1170.0590.871
Number of reflections85931344413558
<I/σ(I)>11.6329.542.19
Completeness [%]99.599.698.3
Redundancy6.686.6066.711
CC(1/2)0.9970.9970.809
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9293PEG 4000 MgCl2 Tris Glycerol Methanol

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon