5NN7

KSHV uracil-DNA glycosylase, apo form

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	DIAMOND BEAMLINE I04
Synchrotron site	Diamond
Beamline	I04
Temperature [K]	100
Detector technology	PIXEL
Collection date	2016-12-18
Detector	DECTRIS PILATUS 6M
Wavelength(s)	0.9795
Spacegroup name	P 1 21 1
Unit cell lengths	42.873, 43.038, 57.387
Unit cell angles	90.00, 99.34, 90.00

Refinement procedure

Resolution	56.630 - 2.500
R-factor	0.2074
Rwork	0.206
R-free	0.24810
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	2j8x
RMSD bond length	0.006
RMSD bond angle	1.081
Data reduction software	DIALS (1.3)
Data scaling software	Aimless (0.5.23)
Phasing software	PHASER (2.7.16)
Refinement software	REFMAC (5.8.0158)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	56.630	2.600
High resolution limit [Å]	2.500	2.500
Rmerge	0.061	0.134
Rpim	0.051	0.125
Number of reflections	7316
<I/σ(I)>	13.1	6.9
Completeness [%]	100.0
Redundancy	3.3	3.4
CC(1/2)	0.996	0.978

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	5.5	289	0.1 M bis-tris, 0.2 M sodium chloride, 25% (w/v) PEG 3350