5NMM
The structure of the polo-box domain (PBD) of Plk1 in complex with Alpha-Bromo-3-Iodotoluene.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.92 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 33.360, 93.040, 35.910 |
Unit cell angles | 90.00, 100.22, 90.00 |
Refinement procedure
Resolution | 46.520 - 2.020 |
R-factor | 0.1948 |
Rwork | 0.192 |
R-free | 0.23700 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.868 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.520 | 2.070 |
High resolution limit [Å] | 2.020 | 2.020 |
Rmerge | 0.058 | 0.701 |
Rpim | 0.044 | 0.618 |
Number of reflections | 13900 | 1009 |
<I/σ(I)> | 11.4 | 2.4 |
Completeness [%] | 98.1 | 97.3 |
Redundancy | 3.8 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 200 mM K/Na Tartrate, 20% PEG3350 |