5NK1
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 1k
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2015-01-23 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.918409 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 32.710, 107.137, 40.412 |
| Unit cell angles | 90.00, 108.69, 90.00 |
Refinement procedure
| Resolution | 38.282 - 1.548 |
| R-factor | 0.1682 |
| Rwork | 0.167 |
| R-free | 0.19310 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5i9u |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.939 |
| Data reduction software | XDS (XDSapp 2.0) |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.282 | 1.640 |
| High resolution limit [Å] | 1.548 | 1.550 |
| Rmeas | 0.092 | 0.688 |
| Number of reflections | 37409 | |
| <I/σ(I)> | 11.55 | 2.03 |
| Completeness [%] | 97.7 | 95.4 |
| Redundancy | 3.45 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 37.5% MPD/PEG1000/PEG3350 (MD), 0.1 M Amino Acids Mix (MD), 0.1 M Bis-Tris pH6.0 |
