5NK1
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 1k
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-01-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918409 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 32.710, 107.137, 40.412 |
Unit cell angles | 90.00, 108.69, 90.00 |
Refinement procedure
Resolution | 38.282 - 1.548 |
R-factor | 0.1682 |
Rwork | 0.167 |
R-free | 0.19310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5i9u |
RMSD bond length | 0.005 |
RMSD bond angle | 0.939 |
Data reduction software | XDS (XDSapp 2.0) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.282 | 1.640 |
High resolution limit [Å] | 1.548 | 1.550 |
Rmeas | 0.092 | 0.688 |
Number of reflections | 37409 | |
<I/σ(I)> | 11.55 | 2.03 |
Completeness [%] | 97.7 | 95.4 |
Redundancy | 3.45 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 37.5% MPD/PEG1000/PEG3350 (MD), 0.1 M Amino Acids Mix (MD), 0.1 M Bis-Tris pH6.0 |