5NK0
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 1j
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-07 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.97795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 32.318, 104.838, 39.259 |
Unit cell angles | 90.00, 94.53, 90.00 |
Refinement procedure
Resolution | 39.136 - 1.597 |
R-factor | 0.165 |
Rwork | 0.164 |
R-free | 0.19380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5i9u |
RMSD bond length | 0.007 |
RMSD bond angle | 1.075 |
Data reduction software | XDS (XDSapp 2.0) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.136 | 1.690 |
High resolution limit [Å] | 1.597 | 1.600 |
Rmeas | 0.099 | 1.102 |
Number of reflections | 33701 | |
<I/σ(I)> | 14.29 | 1.82 |
Completeness [%] | 97.7 | 95.1 |
Redundancy | 6.95 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 37.5% MPD/PEG1000/PEG3350 (MD), 0.175 M Amino Acids Mix (MD), 0.1 M Buffer System 3 (MD) pH8.5 |