5NFE
Neutron structure of human transthyretin (TTR) T119M mutant at room temperature to 1.85A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | NUCLEAR REACTOR |
Source details | FRM II BEAMLINE BIODIFF |
Synchrotron site | FRM II |
Beamline | BIODIFF |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Collection date | 2016-09-08 |
Detector | BIODIFF |
Wavelength(s) | 2.67 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 43.710, 86.320, 65.338 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.485 - 1.850 |
R-factor | 0.2173 |
Rwork | 0.213 |
R-free | 0.25360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cm1 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.548 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | REFMAC |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.610 | 1.900 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.164 | 0.526 |
Rpim | 0.136 | 0.499 |
Number of reflections | 19760 | 1278 |
<I/σ(I)> | 3.7 | 1.2 |
Completeness [%] | 90.6 | 83.7 |
Redundancy | 2 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 1.9M sodium malonate pD5.9, 40mg/ml protein | |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 1.9M sodium malonate pD5.9, 40mg/ml protein |