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5NE0

Room temperature in-situ structure of hen egg-white lysozyme from crystals enclosed between ultrathin silicon nitride membranes

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]293
Detector technologyPIXEL
Collection date2017-02-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.00
Spacegroup nameP 43 21 2
Unit cell lengths79.500, 79.500, 37.810
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.750 - 1.570
R-factor0.1665
Rwork0.166
R-free0.18390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2lyz
RMSD bond length0.005
RMSD bond angle0.770
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.7501.610
High resolution limit [Å]1.5701.570
Rmeas0.0500.847
Number of reflections308411669
<I/σ(I)>13.741.04
Completeness [%]95.495.2
Redundancy3.96
CC(1/2)0.9900.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29390 ul (50mg/ml H2O) lysozyme solution + 20 ul of the precipitant solution (0.1M NaAc 0.6M NaCl) and 10ul 25% ethylene glycol (in water) were mixed together. 20 microliters from this mixture deposited onto the silicon nitride chip.

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