5NB0
Crystal structures of homooligomers of collagen type IV. alpha3NC1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-07-26 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.0 |
Spacegroup name | H 3 |
Unit cell lengths | 131.518, 131.518, 248.855 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 51.780 - 2.700 |
R-factor | 0.1639 |
Rwork | 0.163 |
R-free | 0.17580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1t60 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.146 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 51.783 | 8.540 | 2.850 |
High resolution limit [Å] | 2.700 | 6.040 | 2.700 |
Rmerge | 0.034 | 0.264 | |
Rmeas | 0.110 | 0.044 | 0.347 |
Rpim | 0.069 | 0.027 | 0.223 |
Total number of observations | 96546 | ||
Number of reflections | 43361 | ||
<I/σ(I)> | 11.2 | 17.3 | 2.1 |
Completeness [%] | 98.4 | 99.4 | 95 |
Redundancy | 2.2 | 2.5 | 2.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 6% PEG3350, BisTrisPropane pH 7.5 and MgCl2 0.2 M |