5NAQ
Crystal structure of native 6-phospho-glucosidase LpBgl from Lactobacillus plantarum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM16 |
Synchrotron site | ESRF |
Beamline | BM16 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-02-28 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9794 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 196.688, 191.683, 105.931 |
Unit cell angles | 90.00, 102.75, 90.00 |
Refinement procedure
Resolution | 61.233 - 2.480 |
R-factor | 0.1618 |
Rwork | 0.159 |
R-free | 0.21680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3cmj |
RMSD bond length | 0.008 |
RMSD bond angle | 0.993 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.233 | 2.610 |
High resolution limit [Å] | 2.480 | 2.480 |
Rmerge | 0.117 | 0.431 |
Rpim | 0.076 | 0.281 |
Number of reflections | 126809 | 18978 |
<I/σ(I)> | 6.9 | 2.3 |
Completeness [%] | 94.0 | 96.5 |
Redundancy | 3 | 2.9 |
CC(1/2) | 0.987 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 15% (w/v) PEG 3350, 0.2 M di-ammonium phosphate, 0.1 M sodium cacodylate, pH 6.4, 2 mM DTT and detergent CTAB. |