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5N71

CRYSTAL STRUCTURE OF MATURE CATHEPSIN D FROM THE TICK IXODES RICINUS (IRCD1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.2
Synchrotron siteBESSY
Beamline14.2
Temperature [K]100
Detector technologyCCD
Collection date2015-12-15
DetectorRAYONIX MX-225
Wavelength(s)0.918410
Spacegroup nameP 41 21 2
Unit cell lengths98.156, 98.156, 90.795
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.080 - 1.880
R-factor0.19933
Rwork0.198
R-free0.22441
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.014
RMSD bond angle1.552
Data reduction softwareXDS
Data scaling softwareXDS
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.0801.990
High resolution limit [Å]1.8801.880
Rmerge0.0850.948
Number of reflections36745
<I/σ(I)>16.162.33
Completeness [%]99.698
Redundancy7.98
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291CRYSTALLIZATION CONDITIONS: 1:1 PROTEIN (6 MG/ML IN 2 MM BIS-TRIS, PH 6.5, 20 MM SODIUM CHLORIDE) TO RESERVOIR (0.2 M AMMONIUM SULFATE, 0.1 M SODIUM ACETATE, PH 4.6, 30% PEG2000 MME), CRYOCOOLED IN MOTHER LIQUOR, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K

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