5N4O
Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule (E)-3-(p-tolyl)acrylic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-02 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979 |
Spacegroup name | P 65 |
Unit cell lengths | 97.905, 97.905, 80.323 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.394 - 2.220 |
R-factor | 0.1822 |
Rwork | 0.181 |
R-free | 0.19590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3we8 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.794 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.350 |
High resolution limit [Å] | 2.220 | 2.220 |
Rmeas | 0.064 | 0.552 |
Number of reflections | 21715 | 3450 |
<I/σ(I)> | 23.11 | 5.86 |
Completeness [%] | 99.7 | 98.4 |
Redundancy | 8.55 | 8.26 |
CC(1/2) | 0.990 | 0.940 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | HEPES, MgACE, Glycerol, DTT, BIS-TRIS-propane, PEG3350, Ethylene-glycol, DMSO, Ethylene-glycol |