5N2K
Structure of unbound Briakinumab FAb
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 85.250, 172.540, 138.159 |
Unit cell angles | 90.00, 106.16, 90.00 |
Refinement procedure
Resolution | 81.884 - 2.219 |
R-factor | 0.2044 |
Rwork | 0.204 |
R-free | 0.23360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Separate constant and variable domains coming from Modeller |
RMSD bond length | 0.003 |
RMSD bond angle | 0.598 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_2614: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.440 | 2.340 |
High resolution limit [Å] | 2.219 | 2.219 |
Rmeas | 0.110 | 0.917 |
Number of reflections | 178979 | 26837 |
<I/σ(I)> | 8.85 | 2.17 |
Completeness [%] | 94.7 | 96.5 |
Redundancy | 4.09 | 4.11 |
CC(1/2) | 0.995 | 0.686 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 287 | Microseed matrix screen. Seed stock 22% (w/v) PEG 3350, 40 mM Glycine. Mother liquor 200 mM NH4I, 20% (w/v) PEG 3350. |