5N08
Structure of the apo form of the NO response regulator NsrR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-09 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 159.530, 159.530, 76.560 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.139 - 3.901 |
R-factor | 0.269802059181 |
Rwork | 0.270 |
R-free | 0.27673 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | holo-NsrR |
RMSD bond length | 0.005 |
RMSD bond angle | 0.869 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.140 | 4.040 |
High resolution limit [Å] | 3.900 | 3.900 |
Rmerge | 0.180 | 2.274 |
Rpim | 0.063 | 0.907 |
Number of reflections | 10293 | 984 |
<I/σ(I)> | 9.7 | 0.9 |
Completeness [%] | 98.2 | 96.8 |
Redundancy | 7.8 | 7.8 |
CC(1/2) | 0.999 | 0.164 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 298 | MPD, Tris, anaerobic |